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networkx-backbone 0.1.0 documentation

  • Installation
  • Quick Start
  • Concepts
  • User Guide
  • Tutorials
    • API Reference
    • Changelog
    • Contributing
  • GitHub
  • Installation
  • Quick Start
  • Concepts
  • User Guide
  • Tutorials
  • API Reference
  • Changelog
  • Contributing
  • GitHub

Section Navigation

  • Statistical Backbone Extraction
  • Proximity-Based Edge Scoring
  • Structural Backbone Methods
  • Bipartite Projection Backbones
  • Comparing Multiple Methods
  • Unweighted Graph Sparsification
  • Les Miserables Benchmark
  • Graph Comparison Gallery
  • Tutorials
  • Graph Comparison Gallery

Graph Comparison Gallery#

This gallery compares each backbone method against a reference graph. Removed nodes are colored red and retained edges are drawn as thicker black lines.

For readability, isolates are removed from each backbone before plotting.

Les Miserables (Non-Bipartite Methods)#

Glab Filter#

  • Module: hybrid

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 6 nodes, 5 edges

  • Nodes removed: 71

Backbone comparison visualization

Adamic Adar Index#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 26 nodes, 76 edges

  • Nodes removed: 51

Backbone comparison visualization

Cosine Backbone#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 27 nodes, 76 edges

  • Nodes removed: 50

Backbone comparison visualization

Dice Backbone#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 27 nodes, 76 edges

  • Nodes removed: 50

Backbone comparison visualization

Graph Distance Proximity#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 51 nodes, 76 edges

  • Nodes removed: 26

Backbone comparison visualization

Hub Depressed Index#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 29 nodes, 76 edges

  • Nodes removed: 48

Backbone comparison visualization

Hub Promoted Index#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 26 nodes, 76 edges

  • Nodes removed: 51

Backbone comparison visualization

Jaccard Backbone#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 27 nodes, 76 edges

  • Nodes removed: 50

Backbone comparison visualization

Lhn Local Index#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 39 nodes, 76 edges

  • Nodes removed: 38

Backbone comparison visualization

Local Path Index#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 24 nodes, 76 edges

  • Nodes removed: 53

Backbone comparison visualization

Neighborhood Overlap#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 22 nodes, 76 edges

  • Nodes removed: 55

Backbone comparison visualization

Preferential Attachment Score#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 33 nodes, 76 edges

  • Nodes removed: 44

Backbone comparison visualization

Resource Allocation Index#

  • Module: proximity

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 33 nodes, 76 edges

  • Nodes removed: 44

Backbone comparison visualization

Disparity Filter#

  • Module: statistical

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 10 nodes, 9 edges

  • Nodes removed: 67

Backbone comparison visualization

Ecm Filter#

  • Module: statistical

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 254 edges

  • Nodes removed: 0

  • Validation warning: Filtered edge count equals the original graph. Re-test and validate this method's threshold or parameters.

Backbone comparison visualization

Lans Filter#

  • Module: statistical

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 109 edges

  • Nodes removed: 0

Backbone comparison visualization

Marginal Likelihood Filter#

  • Module: statistical

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 58 nodes, 70 edges

  • Nodes removed: 19

Backbone comparison visualization

Multiple Linkage Analysis#

  • Module: statistical

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 109 edges

  • Nodes removed: 0

Backbone comparison visualization

Noise Corrected Filter#

  • Module: statistical

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 70 nodes, 98 edges

  • Nodes removed: 7

Backbone comparison visualization

Doubly Stochastic Filter#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 109 edges

  • Nodes removed: 0

Backbone comparison visualization

Edge Betweenness Filter#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 77 edges

  • Nodes removed: 0

Backbone comparison visualization

Global Sparsification#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 44 nodes, 102 edges

  • Nodes removed: 33

Backbone comparison visualization

Global Threshold Filter#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 58 nodes, 157 edges

  • Nodes removed: 19

Backbone comparison visualization

H Backbone#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 19 nodes, 22 edges

  • Nodes removed: 58

Backbone comparison visualization

High Salience Skeleton#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 76 edges

  • Nodes removed: 0

Backbone comparison visualization

Maximum Spanning Tree Backbone#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 76 edges

  • Nodes removed: 0

Backbone comparison visualization

Metric Backbone#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 163 edges

  • Nodes removed: 0

Backbone comparison visualization

Modularity Backbone#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 44 nodes, 72 edges

  • Nodes removed: 33

Backbone comparison visualization

Node Degree Filter#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 60 nodes, 237 edges

  • Nodes removed: 17

Backbone comparison visualization

Planar Maximally Filtered Graph#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 162 edges

  • Nodes removed: 0

Backbone comparison visualization

Primary Linkage Analysis#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 69 edges

  • Nodes removed: 0

Backbone comparison visualization

Strongest N Ties#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 113 edges

  • Nodes removed: 0

Backbone comparison visualization

Ultrametric Backbone#

  • Module: structural

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 118 edges

  • Nodes removed: 0

Backbone comparison visualization

Local Degree#

  • Module: unweighted

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 135 edges

  • Nodes removed: 0

Backbone comparison visualization

Lspar#

  • Module: unweighted

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 136 edges

  • Nodes removed: 0

Backbone comparison visualization

Sparsify#

  • Module: unweighted

  • Original graph: 77 nodes, 254 edges

  • Backbone graph: 77 nodes, 136 edges

  • Nodes removed: 0

Backbone comparison visualization

Davis Southern Women (Bipartite Methods)#

Fdsm#

  • Module: bipartite

  • Original graph: 18 nodes, 153 edges

  • Backbone graph: 11 nodes, 9 edges

  • Nodes removed: 7

Backbone comparison visualization

Fixedcol#

  • Module: bipartite

  • Original graph: 18 nodes, 153 edges

  • Backbone graph: 7 nodes, 9 edges

  • Nodes removed: 11

Backbone comparison visualization

Fixedfill#

  • Module: bipartite

  • Original graph: 18 nodes, 153 edges

  • Backbone graph: 7 nodes, 9 edges

  • Nodes removed: 11

Backbone comparison visualization

Fixedrow#

  • Module: bipartite

  • Original graph: 18 nodes, 153 edges

  • Backbone graph: 16 nodes, 17 edges

  • Nodes removed: 2

Backbone comparison visualization

Sdsm#

  • Module: bipartite

  • Original graph: 18 nodes, 153 edges

  • Backbone graph: 6 nodes, 3 edges

  • Nodes removed: 12

Backbone comparison visualization

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Les Miserables Benchmark

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API Reference

On this page
  • Les Miserables (Non-Bipartite Methods)
    • Glab Filter
    • Adamic Adar Index
    • Cosine Backbone
    • Dice Backbone
    • Graph Distance Proximity
    • Hub Depressed Index
    • Hub Promoted Index
    • Jaccard Backbone
    • Lhn Local Index
    • Local Path Index
    • Neighborhood Overlap
    • Preferential Attachment Score
    • Resource Allocation Index
    • Disparity Filter
    • Ecm Filter
    • Lans Filter
    • Marginal Likelihood Filter
    • Multiple Linkage Analysis
    • Noise Corrected Filter
    • Doubly Stochastic Filter
    • Edge Betweenness Filter
    • Global Sparsification
    • Global Threshold Filter
    • H Backbone
    • High Salience Skeleton
    • Maximum Spanning Tree Backbone
    • Metric Backbone
    • Modularity Backbone
    • Node Degree Filter
    • Planar Maximally Filtered Graph
    • Primary Linkage Analysis
    • Strongest N Ties
    • Ultrametric Backbone
    • Local Degree
    • Lspar
    • Sparsify
  • Davis Southern Women (Bipartite Methods)
    • Fdsm
    • Fixedcol
    • Fixedfill
    • Fixedrow
    • Sdsm
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